How to keep order of the correlation plot labels as same in the datafile?
How to keep order of the correlation plot labels as same in the datafile?
In Correlation plot, How can I keep the labels in the same order as in datafile, without rearranging?
This is the scripts I have been using;
library(corrplot)
library(RColorBrewer)
library(Hmisc)
CORR <- df
M <- cor(CORE)
pM <- rcorr(M)
corrplot(pM$r,
type="upper",
order="hclust",
tl.cex = 0.5,
col=colorRampPalette(c("blue4", "white", "firebrick1"))(100),
p.mat = pM$P,
sig.level = 0.05,
insig = "blank"
)
sample data
df <- structure(list(Cytosol_1 = c(2.8, 0.31, 1.21, 1.84, 0.93, 2.71, 2.03, 0.93, 0.89, 0.4, 0.32, 1.8, 1.16, 0.39, 1.16, 0.76, 1.17, 0.95, 0.58, 2.68, 0.88, 0.59, 1.49, 0.48, 0.51, 1.04, 0.89, 3.48, 1.47), Cytosol_2 = c(1.61, 0.22, 1.42, 1.97, 0.88, 1.46, 1.43, 0.74, 0.72, 0.43, 0.51, 2.07, 1.29, 0.71, 0.92, 0.57, 1.9, 0.84, 0.4, 2.72, 1.08, 0.96, 1.75, 0.24, 0.76, 0.99, 2.35, 2.06, 1.24 ), Cytosol_3 = c(1.76, 0.27, 0.77, 1.23, 0.93, 1.43, 0.7, 0.44, 0.58, 0.47, 0.57, 0.85, 0.79, 0.75, 0.95, 0.85, 1.49, 1.19, 0.72, 1.92, 1.11, 1.18, 1.03, 0.75, 0.58, 0.7, 0.79, 1.64, 1.14), Cytosol_4 = c(1.41, 0.98, 0.73, 2.31, 1.07, 1.1, 1.31, 0.66, 0.69, 0.51, 0.53, 1.3, 1.37, 1.55, 0.99, 1.27, 1.22, 0.89, 1.21, 1.56, 1.14, 0.7, 0.3, 0.63, 1.73, 1.49, 0.92, 1.8, 1.7), Cytosol_5 = c(2.36, 0.25, 1.43, 2.76, 0.91, 2.88, 2.73, 0.79, 0.71, 0.15, 0.92, 1.94, 1.12, 0.64, 2.07, 0.68, 1.51, 0.66, 0.51, 1.91, 1.61, 0.68, 0.73, 0.7, 0.94, 1.24, 2.45, 3.12, 1.58), Ribosome_6 = c(1.52, 1.09, 1.58, 1.29, 0.92, 1.12, 0.8, 0.51, 0.87, 0.58, 0.42, 0.72, 1.39, 1.14, 1.87, 1.11, 1.11, 1.07, 0.84, 1.11, 1.17, 0.45, 0.49, 0.59, 0.89, 0.79, 0.67, 1.66, 1.86), Ribosome_7 = c(4.16, 0.98, 1.79, 2.21, 1.21, 1.31, 1.01, 0.02, 0.82, 0.51, 0.81, 0.73, 2.34, 1.04, 1.99, 0.92, 2.2, 0.74, 0.25, 1.71, 1.43, 0.67, 1.19, 0.49, 1.5, 1.14, 0.92, 3.67, 2.68), Ribosome_8 = c(2.02, 0.95, 1.79, 1.47, 0.87, 1.88, 0.97, 0.51, 0.77, 0.66, 0.54, 1, 1.54, 0.92, 1.73, 1.32, 1.89, 0.97, 0.87, 1.26, 1.1, 0.61, 0.49, 0.57, 0.91, 0.76, 0.86, 3.37, 3.1), Ribosome_9 = c(2.67, 0.45, 1.45, 1.41, 0.56, 1.93, 1.29, 0.44, 0.58, 0.38, 0.3, 1.15, 1.5, 0.67, 1.38, 0.72, 1.71, 0.74, 0.5, 2.2, 1.36, 0.74, 1.06, 0.54, 0.72, 0.83, 1.27, 2.55, 1.4), Ribosome_10 = c(2.19, 0.55, 1.39, 1.56, 0.62, 1.67, 1.31, 0.47, 0.46, 0.35, 0.4, 1.02, 1.32, 0.7, 0.96, 0.6, 1.63, 0.94, 0.38, 1.6, 0.92, 0.71, 0.81, 0.56, 0.77, 0.73, 1.14, 2.42, 1.11 ), ER_17 = c(1.41, 0.29, 0.32, 0.76, 0.7, 2.75, 2.78, 0.8, 0.96, 0.28, 0.82, 2.15, 1.19, 0.55, 0.78, 0.97, 1.42, 1.22, 0.92, 1.84, 0.6, 0.69, 0.43, 0.39, 0.38, 0.48, 0.36, 2.17, 1.03), ER_18 = c(1.02, 0.43, 0.98, 1.91, 0.88, 3.19, 1.05, 1.65, 0.53, 1.08, 0.39, 1.1, 0.36, 0.56, 0.58, 1.13, 1.25, 1.03, 0.79, 1.67, 0.56, 0.84, 1.17, 1.05, 0.18, 0.69, 0.09, 1.58, 0.47), ER_19 = c(0.58, 0.72, 0.58, 1.42, 0.52, 2.18, 0.95, 0.32, 1.44, 0.86, 0.24, 0.8, 0.62, 0.34, 0, 1.29, 1.29, 0.84, 1.43, 4.48, 1.82, 0.97, 0.83, 1.25, 0.29, 0.03, 1.48, 1.72, 1.89), Extracellular_20 = c(2.77, 0.43, 2.23, 1.86, 0.51, 2.96, 1.41, 0.91, 0.61, 0.64, 0.84, 2.03, 1.34, 0.69, 0.82, 0.5, 1.18, 0.77, 0.59, 1.65, 1, 0.74, 1, 0.55, 1.38, 1.38, 1.82, 1.58, 1.02), Extracellular_21 = c(3.4, 0.67, 1.91, 1.76, 0.77, 1.65, 1.04, 0.48, 0.53, 0.34, 0.48, 1.24, 1.49, 1.07, 1.24, 0.81, 1.4, 0.85, 0.46, 1.52, 0.9, 0.81, 0.6, 0.57, 1.32, 1.3, 2.22, 1.29, 0.98), Extracellular_22 = c(0.52, 0.01, 0.33, 2.25, 1.05, 2.63, 2.5, 0.99, 0.53, 1.21, 1.43, 3.2, 0.32, 0.2, 0.23, 0.52, 1.07, 0.51, 0.55, 2.58, 1.5, 1.19, 2.16, 0.81, 0.02, 0.1, 0.2, 2.38, 1.36), Extracellular_23 = c(0.16, 0, 0, 1.8, 0.74, 1.45, 2.6, 0.8, 1.68, 1.63, 2.41, 1.46, 0.52, 0.67, 0.05, 1.12, 0.78, 0.62, 0.56, 1.74, 1.03, 1.74, 1.14, 1.33, 0, 0, 0, 0.96, 1.46)), class = "data.frame", row.names = c(NA, -29L))
1 Answer
1
The corrplot function has an "order" argument, which allows you to specify how the rows and columns of the plot are arranged. Setting order = 'original' preserves the ordering in the source data frame:
corrplot
order = 'original'
corrplot(pM$r,
type="upper",
order="original",
tl.cex = 0.5,
col=colorRampPalette(c("blue4", "white", "firebrick1"))(100),
p.mat = pM$P,
sig.level = 0.05,
insig = "blank"
)

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Thank you very much Dobres.
– Oncidium
Jun 30 at 14:07